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Fixing small bugs

master
Benito Marcote 2 years ago
parent
commit
6019ec15d6
  1. 12
      post_processing.sh

12
post_processing.sh

@ -194,10 +194,16 @@ function post_process_pipe() {
# Input file and minimal modifications
cp ../template.inp ${exp}.inp.txt
replace "userno = 3602" "userno = ${give_me_next_userno.sh}" -- ${exp}.inp.txt
replace "userno = 3602" "userno = $(give_me_next_userno.sh)" -- ${exp}.inp.txt
replace "experiment = n05c3" "experiment = ${exp}" -- ${exp}.inp.txt
echo "You should now edit the input file and run the EVN pipeline by your own.\n"
read -q "REPLY?You should now edit the input file... Are you ready to run the EVN pipeline? (y/n) "
if [[ ! $REPLY == 'y' ]];then
exit
fi
echo '\n'
EVN.py ${exp}.inp.txt
read -q "REPLY?Do you want to continue (pipeline properly finished)? (y/n) "
if [[ ! $REPLY == 'y' ]];then
exit
@ -206,7 +212,7 @@ function post_process_pipe() {
cd $OUT/${exp}
comment_tasav_file.py ${exp}
feedback.pl -exp '${exp}' -jss 'marcote'
feedback.pl -exp "${exp}" -jss 'marcote'
echo "You may need to modify the comment file and/or run again feedback.pl\n"
read -q "REPLY?You may want to archive the pipeline results and protect them afterwards. (y/n) "

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