Proper repackaging

app.py

@@ -1,17 +1,16 @@
 #! /usr/bin/env python3
 # -*- coding: utf-8 -*-
-"""EVN Calculator.
+"""EVN Observation Planner.
 
-Program to compute the source elevation visibility and expected thermal
-noise level for a given EVN observation.
+Program to compute the source elevation visibility
+and expected thermal noise level for a given EVN observation.
 """
 
 __author__ = "Benito Marcote"
-__copyright__ = "Copyright 2020, Joint Insitute for VLBI-ERIC (JIVE)"
 __credits__ = "Benito Marcote"
-__license__ = "GPL"
+__license__ = "LGPLv3+"
 __date__ = "2020/04/21"
-__version__ = "1.0"
+__version__ = "0.3b2"
 __maintainer__ = "Benito Marcote"
 __email__ = "marcote@jive.eu"
 __status__ = "Development"   # Prototype, Development, Production.
@@ -47,13 +46,13 @@ iers.conf.download_cache_lock_attempts = 10
 
 from astroplan import FixedTarget
 
-from src import freqsetups as fs
-from src import stations
-from src import functions as fx
-from src import observation
-from src import graphical_elements as ge
+from vlbiplanobs import freqsetups as fs
+from vlbiplanobs import stations
+from vlbiplanobs import functions as fx
+from vlbiplanobs import observation
+from vlbiplanobs import graphical_elements as ge
 # adding the possibility of disabled
-from src.Checkbox import Checkbox
+from vlbiplanobs.Checkbox import Checkbox
 
 
 current_directory = path.dirname(path.realpath(__file__))

doc/notes.md

@@ -2,16 +2,12 @@
 #  EVN Source Elevation App
 
 
-
-does_eEVN = ['Ef', 'Hh', 'Jb2', 'Jb1', 'Mc', 'Nt', 'On', 'T6', 'Mh', 'Tr', 'Ys', 'Wb', 'Bd', 'Sv', 'Zc', 'Ir', 'Sr', 'Ur', 'Cm', 'Kn', 'Pi', 'Da', 'De']
-
-
 ## Program structure
 
 - app.py
 - README.md
 - docs/
-- src/
+- vlbiplanobs/
     - stations.py
     - sources.py
     - plots.py

setup.py

@@ -0,0 +1,83 @@
+from setuptools import setup
+import pathlib
+
+# Get the long description from the README file
+long_description = (pathlib.Path(__file__).parent.resolve() / 'README.md').read_text(encoding='utf-8')
+
+
+setup(name='vlbiplanobs',
+        # Versions should comply with PEP 440:
+        # https://www.python.org/dev/peps/pep-0440/
+        # [N!]N(.N)*[{a|b|rc}N][.postN][.devN]
+        version='1.0b2',
+        # one-line description or tagline of what your project does
+        description='Planner for VLBI observations',
+        # "Description" metadata field
+        long_description=long_description,
+        long_description_content_type='text/markdown',
+        url='https://github.com/bmarcote/vlbi_calculator',
+        author='B. Marcote',
+        author_email='marcote@jive.eu',
+        # Classifiers help users find your project by categorizing it.
+        # For a list of valid classifiers, see https://pypi.org/classifiers/
+        classifiers=[  # Optional
+            # How mature is this project? Common values are
+            #   3 - Alpha
+            #   4 - Beta
+            #   5 - Production/Stable
+            'Development Status :: 4 - Beta',
+            # Indicate who your project is intended for
+            'Intended Audience :: Science/Research',
+            'Topic :: Scientific/Engineering :: Astronomy',
+            # Pick your license as you wish
+            'License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+)',
+            # Specify the Python versions you support here. In particular, ensure
+            # that you indicate you support Python 3. These classifiers are *not*
+            # checked by 'pip install'. See instead 'python_requires' below.
+            'Programming Language :: Python :: 3',
+            'Programming Language :: Python :: 3.7',
+            'Programming Language :: Python :: 3.8',
+            'Programming Language :: Python :: 3 :: Only',
+        ],
+        keywords='astronomy, astrophysics, cosmology, radio, science, observations, planner, coordinate',
+        # When your source code is in a subdirectory under the project root, e.g.
+        # `src/`, it is necessary to specify the `package_dir` argument.
+        # package_dir={'': 'src'},  # Optional
+        packages=find_packages(where='vlbiplanobs'),
+        python_requires='>=3.7, <4',
+        # This field lists other packages that your project depends on to run.
+        # Any package you put here will be installed by pip when your project is
+        # installed, so they must be valid existing projects.
+        #
+        # For an analysis of "install_requires" vs pip's requirements files see:
+        # https://packaging.python.org/en/latest/requirements.html
+        # install_requires=[''],
+
+        # If there are data files included in your packages that need to be
+        # installed, specify them here.
+        # package_data={
+        #     'sample': ['package_data.dat'],
+        # },
+
+        # Although 'package_data' is the preferred approach, in some case you may
+        # need to place data files outside of your packages. See:
+        # http://docs.python.org/distutils/setupscript.html#installing-additional-files
+        #
+        # In this case, 'data_file' will be installed into '<sys.prefix>/my_data'
+        data_files=[('data', ['data/stations_catalog.inp'])],
+        # List additional URLs that are relevant to your project as a dict.
+        #
+        # This field corresponds to the "Project-URL" metadata fields:
+        # https://packaging.python.org/specifications/core-metadata/#project-url-multiple-use
+        #
+        # Examples listed include a pattern for specifying where the package tracks
+        # issues, where the source is hosted, where to say thanks to the package
+        # maintainers, and where to support the project financially. The key is
+        # what's used to render the link text on PyPI.
+        project_urls={  # Optional
+            'Bug Reports': 'https://github.com/bmarcote/vlbi_calculator/issues',
+            # 'Funding': 'https://donate.pypi.org',
+            # 'Say Thanks!': 'http://saythanks.io/to/example',
+            'Source': 'https://github.com/bmarcote/vlbi_calculator/',
+        },
+    )

vlbiplanobs/__init__.py

@@ -0,0 +1,11 @@
+
+import numpy as np
+
+from astropy import coordinates as coord
+from astropy import units as u
+from astropy.io import ascii
+from astropy.time import Time
+from astroplan import FixedTarget
+from astroplan import Observer
+import stations
+import functions

src/functions.py → vlbiplanobs/functions.py

@@ -1,13 +1,6 @@
 """Different functions that are required to operate the program
 """
-
 import configparser
-from astropy import coordinates as coord
-from astropy import units as u
-from astropy.io import ascii
-
-from src import stations
-
 
 def get_stations_from_configfile(filename='data/stations_catalog.inp'):
     """Retrieves the information concerning all stations available in the 'filename'

src/graphical_elements.py → vlbiplanobs/graphical_elements.py

@@ -1,5 +1,3 @@
-import numpy as np
-from astropy import units as u
 import dash
 from dash.dependencies import Input, Output, State
 import dash_core_components as dcc
@@ -7,8 +5,6 @@ import dash_html_components as html
 import dash_bootstrap_components as dbc
 import plotly.express as px
 
-from src import functions as fx
-
 
 
 def tooltip(message, idname, trigger='?', placement='right',trigger_is_sup=True,  **kwargs):
@@ -189,14 +185,14 @@ def summary_card_beam(app, obs):
 def summary_card_times(app, obs):
     """Creates a summary card showing the observing times, and the resulting data size.
     """
-    prtobstimes = fx.print_obs_times(obs)
+    prtobstimes = functions.print_obs_times(obs)
     if '\n' in prtobstimes:
-        tmp = [html.Span(t) for t in fx.print_obs_times(obs).split('\n')]
+        tmp = [html.Span(t) for t in functions.print_obs_times(obs).split('\n')]
         for i in range(len(tmp)-1):
             tmp.insert(2*i+1, html.Br())
             temp_msg = [tmp]
     else:
-        temp_msg = [f"{fx.print_obs_times(obs)}."]
+        temp_msg = [f"{functions.print_obs_times(obs)}."]
 
     temp_msg += [f"The observation lasts for {optimal_units(obs.duration, [u.h, u.min, u.s, u.ms]):.3n}, of which {optimal_units(obs.ontarget_time, [u.h, u.min, u.s, u.ms]):.3n} are on target."]
     n_files = int(np.ceil(obs.datasize()/(2.0*u.GB)))

src/observation.py → vlbiplanobs/observation.py

@@ -3,16 +3,6 @@
 time range and the observing band.
 """
 
-import numpy as np
-# from scipy.interpolate import griddata
-from astropy.time import Time
-from astropy import coordinates as coord
-from astropy import units as u
-from astroplan import FixedTarget
-
-from . import stations
-
-
 class SourceNotVisible(Exception):
     pass
 

vlbiplanobs/setup.cfg

@@ -0,0 +1,5 @@
+[metadata]
+
+# This includes the license file(s) in the wheel.
+# https://wheel.readthedocs.io/en/stable/user_guide.html#including-license-files-in-the-generated-wheel-file
+license_files = LICENSE

src/stations.py → vlbiplanobs/stations.py

@@ -1,9 +1,3 @@
-import numpy as np
-import astropy.units as u
-import astropy.coordinates as coord
-from astropy.time import Time
-from astropy.io import ascii
-from astroplan import Observer
 
 
 class Station(object):